Taxonomic Swap 43641 (提交於 2019-01-17)

Genetics show the San Bernadino squirrels should be a subspecies of the newly recognized G. oregonensis.

Genetic data reveal a cryptic species... (引用)
jwidness 於 2018年11月29日 04:15 所新增 | 由 jwidness 於 2019年01月17日 所提交
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@loarie this seems like a pretty straightforward swap

發佈由 jwidness 大約 6 年 前

Quoting from Arbogast 2017:

The mtDNA control region sequence data presented here show that although flying squirrels from California are part of the Pacific Coastal mtDNA clade (i.e., G. oregonensis), they are notably divergent from the non-California members of the PC clade.
Our proposed taxonomic change affects subspecies nomenclature in the following ways: 5 subspecies (G. s. californicus, G. s. lascivus, G. s. stephensi, G. s. flaviventris, and G. s. klamathensis) would clearly fall under G. oregonensis and would therefore require the requisite taxonomic change.

發佈由 jwidness 大約 6 年 前

@jwidness there is a taxon framework for mammals that only extends down to species. Since this only involves ssp you should be able to make this swap correct? Before taxon frameworks 'complete taxa' always went down to ssp so this wouldn't have worked then, but the new system should accomodate this unless there's a bug

Also let me know if you want to help curate the mammal taxonomy covered by the framework - right now its using IUCN GMA - not sure if folks are still advocating moving to ASM

發佈由 loarie 大約 6 年 前

@loarie I'm getting the message:
Heads up: One or both of the input taxa involved in this change are within a taxon framework Only site admins or curators of that taxon framework can commit changes affecting covered taxa.

I assume this is because the swap moves the subspecies from one species epithet to a different one, so technically involves a change at the species level.

I'd be happy to help curate mammal taxonomy.

發佈由 jwidness 大約 6 年 前

hmm - that should be allowed so this is a bug. Let me look into this

發佈由 loarie 大約 6 年 前

I was able to add the subspecies G. o. californicus, I just couldn't swap it for G. s. californicus.

發佈由 jwidness 大約 6 年 前

@loarie any progress on this bug?

發佈由 jwidness 大約 6 年 前

@loarie I still don't have an option to commit this, so I'm assuming the bug is still there and I'm not a curator for mammals yet?

發佈由 jwidness 超過 5 年 前

working on this but not done - thanks for your patience

發佈由 loarie 超過 5 年 前

No problem, sorry to keep bothering you.

發佈由 jwidness 超過 5 年 前

@jwidness - this should be fixed. (e.g. iNat should realize that Glaucomys oregonensis californicus is not covered by a curated taxon framework and therefore not protected) Can you try committing this?

發佈由 loarie 超過 5 年 前

The commit worked -- i.e. G. o. californicus replaced G. s. californicus (which is now inactive), but I'm not seeing IDs auto-updated. Not sure if I did something wrong or I just need to wait?

發佈由 jwidness 超過 5 年 前

prob just need to wait

發佈由 loarie 超過 5 年 前

Yep, I checked back seconds before the outage and it was updated, but I couldn't get a comment in before it went down.

發佈由 jwidness 超過 5 年 前

cool!

發佈由 loarie 超過 5 年 前

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